Cooduvalli Shashikant
Former Chair, Intercollege Graduate Degree Program in Bioinformatics and Genomics
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305 Wartik Lab
University Park, PA 16802 - css13@psu.edu
- 814-883-5572
Research Summary
Developmental and evolutionary aspects of regulation of patterning genes.
Links
Most Recent Publications
Functional and molecular features of the Id4<sup>+</sup> germline stem cell population in mouse testes
Frieda Chan, Melissa J. Oatley, Amy V. Kaucher, Qi En Yang, Charles J. Bieberich, Cooduvalli S. Shashikant, Jon M. Oatley, 2014, Genes and Development on p. 1351-1362
Cdx1 is essential for the initiation of HoxC8 expression during early embryogenesis
Rachel Ben Haroush Schyr, Yehuda Shabtai, Cooduvalli S. Shashikant, Abraham Fainsod, 2012, FASEB Journal on p. 2674-2684
A FOXA1-binding enhancer regulates Hoxb13 expression in the prostate gland
Ryan P. McMullin, Albert Dobi, Laura N. Mutton, András Orosz, Shilpi Maheshwari, Cooduvalli S. Shashikant, Charles J. Bieberich, 2010, Proceedings of the National Academy of Sciences of the United States of America on p. 98-103
A yeast-based recombinogenic targeting toolset for transgenic analysis of human disease genes
Kevin L. Bentley, Cooduvalli S. Shashikant, Wayne Wang, Nancy H. Ruddle, Frank H. Ruddle, 2010, Annals of the New York Academy of Sciences on p. E58-E68
Evidence for positive and negative regulation of the mouse Cdx2 gene
Wayne C.H. Wang, Cooduvalli S. Shashikant, 2007, Journal of Experimental Zoology Part B: Molecular and Developmental Evolution on p. 308-321
Comparison of diverged Hoxc8 early enhancer activities reveals modification of regulatory interactions at conserved cis-acting elements
Cooduvalli S. Shashikant, Stacey A. Bolanowsky, Sanjay Anand, Shawn M. Anderson, 2007, Journal of Experimental Zoology Part B: Molecular and Developmental Evolution on p. 242-249
Transcriptional regulation of human MAP2 gene in melanoma: Role of neuronal bHLH factors and Notch1 signaling
Kumar M.R. Bhat, Nityanand Maddodi, Cooduvalli Shashikant, Vijayasaradhi Setaluri, 2006, Nucleic Acids Research on p. 3819-3832
Hoxc8 early enhancer of the Indonesian coelacanth, Latimeria menadoensis
Cooduvalli Shashikant, Stacey A. Bolanowski, Joshua Danke, Chris T. Amemiya, 2004, Journal of Experimental Zoology Part B: Molecular and Developmental Evolution on p. 557-563
A comparative analysis of RNA targeting strategies in the thymosin beta 4 gene
Deena L. Gibbons, Coodivaalli Shashikant, Adrian C. Hayday, 2004, Journal of Molecular Biology on p. 1069-1076
Comparative Cis-regulatory analyses identify new elements of the mouse Hoxc8 early enhancer
Wayne C.H. Wang, Sanjay Anand, Dennis R. Powell, Aruna B. Pawashe, Chris T. Amemiya, Cooduvalli S. Shashikant, 2004, Journal of Experimental Zoology Part B: Molecular and Developmental Evolution on p. 436-445
Most-Cited Papers
Functional and molecular features of the Id4<sup>+</sup> germline stem cell population in mouse testes
Frieda Chan, Melissa J. Oatley, Amy V. Kaucher, Qi En Yang, Charles J. Bieberich, Cooduvalli S. Shashikant, Jon M. Oatley, 2014, Genes and Development on p. 1351-1362
News Articles Featuring Cooduvalli Shashikant
Apr 24, 2023
Donna Korzick leads training grant initiatives to new highs
There are many things Penn State does to improve the research environment for graduate students, from investments in instrumentation to the availability of mental health resources to recruitment of quality seminar speakers.
Full Article
Aug 05, 2019
New Bioinformatics and Genomics Chair Looks To Capitalize on Program's Strengths
New chair George Perry is considering opportunities for expanded partnerships that will build on the solid foundations already in place in the BG program.
Full Article