Sally Assmann

Waller Professor of Biology

Sally Assmann

Research Summary

Molecular biology of plant G-proteins and kinases. Phytohormone regulation of signal transduction and RNA processing. Second messenger regulation of ion channels in plant cells.

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Publication Tags

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Arabidopsis Proteins Genome Rna Heterotrimeric Gtp Binding Proteins G Proteins Rna Structure Climate Gtp Binding Proteins Genes Fluorescence Rna Secondary Structure Prediction Temperature Phenotype Cells Signal Transduction Transcriptome Yeasts Messenger Rna Protein Subunits Direction Compound Abscisic Acid Plant Cells Nucleotides

Most Recent Publications

A network-based modeling framework reveals the core signal transduction network underlying high carbon dioxide-induced stomatal closure in guard cells

Xiao Gan, Palanivelu Sengottaiyan, Kyu Hyong Park, Sarah M. Assmann, Réka Albert, 2024, PLoS Biology

Stomatal responses to VPD utilize guard cell intracellular signaling components

Yotam Zait, Ariel Joseph, Sarah M. Assmann, 2024, Frontiers in Plant Science

Influence of expression and purification protocols on Gα biochemical activity: kinetics of plant and mammalian G protein cycles.

T Gookin, D Chakravorty, Sarah Assmann, 2023, bioRxiv : the preprint server for biology

Extra-large G proteins have extra-large effects on agronomic traits and stress tolerance in maize and rice

Christian F. Cantos, Claude W. dePamphilis, Sarah M. Assmann, 2023, Trends in Plant Science on p. 1033-1044

Rock, scissors, paper: How RNA structure informs function

Sarah Assmann, H Chou, Philip C. Bevilacqua, 2023, Plant Cell on p. 1671-1707

Oryza CLIMtools: A genome–environment association resource reveals adaptive roles for heterotrimeric G proteins in the regulation of rice agronomic traits

Angel Ferrero-Serrano, David Chakravorty, K Kirven, Sarah Assmann, 2023, Plant Communications on p. 100813

Flanking Sequence Cotranscriptionally Regulates Twister Ribozyme Activity

L McKinley, R Kern, Sarah Assmann, Philip Bevilacqua, 2023, Biochemistry on p. 53-68

Inference of a Boolean Network From Causal Logic Implications

Parul Maheshwari, Parul Maheswari, Sarah Assmann, Reka Albert, 2022, Frontiers in Genetics on p. 836856

Genome-wide analysis of the in vivo tRNA structurome reveals RNA structural and modification dynamics under heat stress

Ryota Yamagami, Jacob P. Sieg, Sarah M. Assmann, Philip C. Bevilacqua, 2022, Proceedings of the National Academy of Sciences of the United States of America on p. e2201237119

Experimental demonstration and pan-structurome prediction of climate-associated riboSNitches in Arabidopsis

Angel Ferrero-Serrano, Megan M. Sylvia, Peter C. Forstmeier, Andrew J. Olson, Doreen Ware, Philip C. Bevilacqua, Sarah M. Assmann, 2022, Genome Biology

Most-Cited Papers

In vivo genome-wide profiling of RNA secondary structure reveals novel regulatory features

Yiliang Ding, Yin Tang, Chun Kit Kwok, Yu Zhang, Philip C. Bevilacqua, Sarah M. Assmann, 2014, Nature on p. 696-700

Border control - A membrane-linked interactome of Arabidopsis

Alexander M. Jones, Yuanhu Xuan, Meng Xu, Rui Sheng Wang, Cheng Hsun Ho, Sylvie Lalonde, Chang Hun You, Maria I. Sardi, Saman A. Parsa, Erika Smith-Valle, Tianying Su, Keith A. Frazer, Guillaume Pilot, Réjane Pratelli, Guido Grossmann, Biswa R. Acharya, Heng Cheng Hu, Cawas Engineer, Florent Villiers, Chuanli Ju, Kouji Takeda, Zhao Su, Qunfeng Dong, Sarah M. Assmann, Jin Chen, June M. Kwak, Julian I. Schroeder, Reka Albert, Seung Y. Rhee, Wolf B. Frommer, 2014, Science on p. 711-716

Genome-Wide Analysis of RNA Secondary Structure

Philip C. Bevilacqua, Laura Ritchey, Zhao Su, Sarah M. Assmann, 2016, Annual Review of Genetics on p. 235--266

50 years of Arabidopsis research: Highlights and future directions

Nicholas J. Provart, Jose Alonso, Sarah M. Assmann, Dominique Bergmann, Siobhan M. Brady, Jelena Brkljacic, John Browse, Clint Chapple, Vincent Colot, Sean Cutler, Jeff Dangl, David Ehrhardt, Joanna D. Friesner, Wolf B. Frommer, Erich Grotewold, Elliot Meyerowitz, Jennifer Nemhauser, Magnus Nordborg, Craig Pikaard, John Shanklin, Chris Somerville, Mark Stitt, Keiko U. Torii, Jamie Waese, Doris Wagner, Peter Mccourt, 2016, New Phytologist on p. 921-944

Guard cell sensory systems: recent insights on stomatal responses to light, abscisic acid, and CO<sub>2</sub>

Sarah M. Assmann, Timothy Jegla, 2016, Current Opinion in Plant Biology on p. 157-167

Significant reduction of BiFC non-specific assembly facilitates in planta assessment of heterotrimeric G-protein interactors

Timothy E. Gookin, Sarah M. Assmann, 2014, Plant Journal on p. 553-567

The RNA structurome: Transcriptome-wide structure probing with next-generation sequencing

Chun Kit Kwok, Yin Tang, Sarah M. Assmann, Philip C. Bevilacqua, 2015, Trends in Biochemical Sciences on p. 221-232

Extra-large G proteins expand the repertoire of subunits in arabidopsis heterotrimeric G protein signaling

David Chakravorty, Timothy E. Gookin, Matthew J. Milner, Yunqing Yu, Sarah M. Assmann, 2015, Plant Physiology on p. 512-29

Plant single-cell and single-cell-type metabolomics

Biswapriya B. Misra, Sarah M. Assmann, Sixue Chen, 2014, Trends in Plant Science on p. 637-646

The G protein β-subunit, AGB1, interacts with FERONIA in RALF1-regulated stomatal movement

Yunqing Yu, David Chakravorty, Sarah M. Assmann, 2018, Plant Physiology on p. 2426-2440